Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 AC026316.1-201ENST00000398900 414 ntBASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 AC128714.1-201ENST00000637035 887 ntBASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM48Q8IWZ4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AL022313.4-201ENST00000562756 2046 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AL122018.1-201ENST00000446607 2310 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AC099521.3-201ENST00000624251 2938 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 TUBB8P4-201ENST00000511806 1324 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AC006480.2-201ENST00000609770 1337 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 AC074138.1-201ENST00000611182 1303 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 BX640514.1-201ENST00000583223 1918 ntBASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM48Q8IWZ4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM48Q8IWZ4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms