Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AC061965.1-201ENST00000560524 1465 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 FAM90A2P-201ENST00000511144 1395 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 FAM90A25P-201ENST00000528404 1395 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 CAP2P1-201ENST00000557743 1390 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AC007274.2-201ENST00000421675 662 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 RPL8P2-201ENST00000430538 502 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AK2P2-201ENST00000439142 405 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 IMP3P2-201ENST00000489760 475 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL67P-201ENST00000492147 296 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AC007718.1-201ENST00000621078 280 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AC015967.2-201ENST00000624092 234 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AC006435.4-201ENST00000625037 234 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 AL356737.1-201ENST00000634391 234 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 TBC1D3J-201ENST00000620719 1426 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LYSMD3Q7Z3D4 AC019294.4-201ENST00000561777 2905 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 MIR645-201ENST00000385283 94 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AL583805.1-201ENST00000391389 531 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 BX679664.3-201ENST00000414070 555 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC113935.1-201ENST00000471722 555 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC114947.1-202ENST00000514136 344 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC105129.2-201ENST00000559536 390 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 MIR3677-201ENST00000578964 60 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 AC072061.1-201ENST00000569710 2234 ntBASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD3Q7Z3D4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms