Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 PTPN20CP-201ENST00000614090 920 ntBASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTC1Q2NKJ3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AC016397.2-201ENST00000624848 1985 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 GRPEL2P1-201ENST00000453145 339 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 RN7SL375P-201ENST00000492442 298 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AC145285.5-201ENST00000562217 361 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AP005264.5-201ENST00000590066 467 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AL160191.2-201ENST00000603975 601 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AL021707.6-201ENST00000609212 491 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AL359091.4-201ENST00000610052 409 ntBASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTC1Q2NKJ3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 LAP3P2-201ENST00000454686 1454 ntBASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 AP000354.1-201ENST00000396982 456 ntBASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 RN7SL788P-201ENST00000460504 316 ntBASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 KRT18P37-201ENST00000520711 1282 ntBASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 AC091769.1-201ENST00000619576 568 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms