Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.43■□□□□ 0.22
IRX3P78415 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.43■□□□□ 0.22
IRX3P78415 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
IRX3P78415 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
IRX3P78415 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX3P78415 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX3P78415 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IRX3P78415 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.43■□□□□ 0.22
IRX3P78415 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX3P78415 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX3P78415 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX3P78415 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.42■□□□□ 0.22
IRX3P78415 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 AC234644.1-201ENST00000406065 370 ntBASIC16.42■□□□□ 0.22
IRX3P78415 AC108734.2-201ENST00000420887 1069 ntBASIC16.42■□□□□ 0.22
IRX3P78415 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 RN7SL788P-201ENST00000460504 316 ntBASIC16.42■□□□□ 0.22
IRX3P78415 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.42■□□□□ 0.22
IRX3P78415 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.42■□□□□ 0.22
IRX3P78415 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 HSPA7-201ENST00000445535 1927 ntBASIC16.42■□□□□ 0.22
IRX3P78415 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 AL731571.1-201ENST00000617058 5428 ntBASIC16.42■□□□□ 0.22
IRX3P78415 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IRX3P78415 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IRX3P78415 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX3P78415 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 RN7SL375P-201ENST00000492442 298 ntBASIC16.41■□□□□ 0.22
IRX3P78415 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.41■□□□□ 0.22
IRX3P78415 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 AC055811.3-201ENST00000584952 686 ntBASIC16.41■□□□□ 0.22
IRX3P78415 AP005264.6-204ENST00000588436 719 ntBASIC16.41■□□□□ 0.22
IRX3P78415 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.41■□□□□ 0.22
IRX3P78415 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX3P78415 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IRX3P78415 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX3P78415 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms