Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM4P67936 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM4P67936 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TPM4P67936 AC103592.1-201ENST00000394513 664 ntBASIC15.82■□□□□ 0.12
TPM4P67936 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM4P67936 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 ST13P19-201ENST00000442505 1124 ntBASIC15.82■□□□□ 0.12
TPM4P67936 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 COX5BP1-201ENST00000507622 393 ntBASIC15.82■□□□□ 0.12
TPM4P67936 AC106760.1-201ENST00000508690 800 ntBASIC15.82■□□□□ 0.12
TPM4P67936 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 RBM8B-201ENST00000555532 525 ntBASIC15.82■□□□□ 0.12
TPM4P67936 AC140912.1-201ENST00000577171 1054 ntBASIC15.82■□□□□ 0.12
TPM4P67936 MIR5189-201ENST00000577370 114 ntBASIC15.82■□□□□ 0.12
TPM4P67936 AL358472.3-201ENST00000608147 415 ntBASIC15.82■□□□□ 0.12
TPM4P67936 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TPM4P67936 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 TMBIM7P-202ENST00000641474 1516 ntBASIC15.82■□□□□ 0.12
TPM4P67936 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM4P67936 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM4P67936 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM4P67936 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TPM4P67936 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 AC010141.1-201ENST00000411585 623 ntBASIC15.81■□□□□ 0.12
TPM4P67936 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 SHC1P1-201ENST00000425230 1745 ntBASIC15.81■□□□□ 0.12
TPM4P67936 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TPM4P67936 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM4P67936 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.81■□□□□ 0.12
TPM4P67936 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 AP003171.2-201ENST00000528208 925 ntBASIC15.81■□□□□ 0.12
TPM4P67936 API5-211ENST00000534695 560 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM4P67936 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 AC140658.4-201ENST00000561990 352 ntBASIC15.81■□□□□ 0.12
TPM4P67936 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM4P67936 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM4P67936 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.81■□□□□ 0.12
TPM4P67936 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TPM4P67936 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM4P67936 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM4P67936 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms