Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
UBA52P62987 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 AC104457.1-201ENST00000401024 814 ntBASIC12.26□□□□□ -0.45
UBA52P62987 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.26□□□□□ -0.45
UBA52P62987 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 HIST2H2BC-201ENST00000498492 580 ntBASIC12.26□□□□□ -0.45
UBA52P62987 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.26□□□□□ -0.45
UBA52P62987 AC079328.1-201ENST00000560358 952 ntBASIC12.26□□□□□ -0.45
UBA52P62987 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.26□□□□□ -0.45
UBA52P62987 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.26□□□□□ -0.45
UBA52P62987 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 AC011498.7-201ENST00000624986 2027 ntBASIC12.26□□□□□ -0.45
UBA52P62987 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
UBA52P62987 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.26□□□□□ -0.45
UBA52P62987 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
UBA52P62987 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
UBA52P62987 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBA52P62987 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
UBA52P62987 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
UBA52P62987 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
UBA52P62987 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 AC079178.1-201ENST00000420915 656 ntBASIC12.25□□□□□ -0.45
UBA52P62987 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.25□□□□□ -0.45
UBA52P62987 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.25□□□□□ -0.45
UBA52P62987 HSPB1P2-201ENST00000448722 546 ntBASIC12.25□□□□□ -0.45
UBA52P62987 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 UPF3AP2-201ENST00000457924 1132 ntBASIC12.25□□□□□ -0.45
UBA52P62987 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.25□□□□□ -0.45
UBA52P62987 AC126915.1-201ENST00000522847 1038 ntBASIC12.25□□□□□ -0.45
UBA52P62987 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.25□□□□□ -0.45
UBA52P62987 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.25□□□□□ -0.45
UBA52P62987 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.25□□□□□ -0.45
UBA52P62987 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 AC015967.2-201ENST00000624092 234 ntBASIC12.25□□□□□ -0.45
UBA52P62987 AC006435.4-201ENST00000625037 234 ntBASIC12.25□□□□□ -0.45
UBA52P62987 AL356737.1-201ENST00000634391 234 ntBASIC12.25□□□□□ -0.45
UBA52P62987 AL645728.2-202ENST00000641679 227 ntBASIC12.25□□□□□ -0.45
UBA52P62987 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.25□□□□□ -0.45
UBA52P62987 REXO1L1P-201ENST00000379010 6598 ntBASIC12.25□□□□□ -0.45
UBA52P62987 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.25□□□□□ -0.45
UBA52P62987 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBA52P62987 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.24□□□□□ -0.45
UBA52P62987 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UBA52P62987 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms