Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 HLA-L-209ENST00000420110 1011 ntBASIC10.48□□□□□ -0.73
HIST1H2BDP58876 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 MIR3180-1-201ENST00000580374 94 ntBASIC10.48□□□□□ -0.73
HIST1H2BDP58876 MIR3180-3-201ENST00000584616 94 ntBASIC10.48□□□□□ -0.73
HIST1H2BDP58876 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 AL356488.2-201ENST00000602755 427 ntBASIC10.48□□□□□ -0.73
HIST1H2BDP58876 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BDP58876 Z97205.2-201ENST00000564697 1639 ntBASIC10.47□□□□□ -0.73
HIST1H2BDP58876 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 PRORSD1P-201ENST00000295112 541 ntBASIC10.47□□□□□ -0.73
HIST1H2BDP58876 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 SPDYE17-201ENST00000412399 783 ntBASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AK4P3-201ENST00000418260 669 ntBASIC10.47□□□□□ -0.73
HIST1H2BDP58876 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC026434.2-201ENST00000506094 1078 ntBASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC027307.2-201ENST00000591252 911 ntBASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HIST1H2BDP58876 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms