Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN20P56880 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 RNA5SP359-201ENST00000364838 113 ntBASIC12.94□□□□□ -0.34
CLDN20P56880 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.94□□□□□ -0.34
CLDN20P56880 AL133466.1-201ENST00000447582 150 ntBASIC12.94□□□□□ -0.34
CLDN20P56880 NUP210P1-202ENST00000504322 710 ntBASIC12.94□□□□□ -0.34
CLDN20P56880 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.94□□□□□ -0.34
CLDN20P56880 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.94□□□□□ -0.34
CLDN20P56880 RN7SL574P-201ENST00000581512 297 ntBASIC12.94□□□□□ -0.34
CLDN20P56880 MIR3188-201ENST00000583494 85 ntBASIC12.94□□□□□ -0.34
CLDN20P56880 MEG3_2.1-201ENST00000611456 105 ntBASIC12.94□□□□□ -0.34
CLDN20P56880 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN20P56880 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CLDN20P56880 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN20P56880 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CLDN20P56880 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN20P56880 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN20P56880 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLDN20P56880 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 MIR497HG-202ENST00000572453 3838 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN20P56880 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN20P56880 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN20P56880 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN20P56880 AC006335.1-201ENST00000445200 547 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN20P56880 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN20P56880 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.93□□□□□ -0.34
CLDN20P56880 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 AC245884.6-201ENST00000515672 1067 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN20P56880 CHMP4BP1-201ENST00000556017 588 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 AC140658.4-201ENST00000561990 352 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN20P56880 AC097724.1-201ENST00000609581 426 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN20P56880 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLDN20P56880 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.93□□□□□ -0.34
CLDN20P56880 AL022313.4-201ENST00000562756 2046 ntBASIC12.93□□□□□ -0.34
CLDN20P56880 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN20P56880 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLDN20P56880 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN20P56880 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms