Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.33□□□□□ -0.28
CLK1P49759 AC026954.1-201ENST00000429771 1293 ntBASIC13.33□□□□□ -0.28
CLK1P49759 YBX1P6-201ENST00000442962 1002 ntBASIC13.33□□□□□ -0.28
CLK1P49759 AC022210.1-201ENST00000449856 793 ntBASIC13.33□□□□□ -0.28
CLK1P49759 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.33□□□□□ -0.28
CLK1P49759 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.33□□□□□ -0.28
CLK1P49759 PPY2P-201ENST00000582808 702 ntBASIC13.33□□□□□ -0.28
CLK1P49759 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CLK1P49759 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 MIR6775-201ENST00000617557 69 ntBASIC13.33□□□□□ -0.28
CLK1P49759 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.33□□□□□ -0.28
CLK1P49759 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.33□□□□□ -0.28
CLK1P49759 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 HSPA8P5-201ENST00000456928 2069 ntBASIC13.33□□□□□ -0.28
CLK1P49759 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.33□□□□□ -0.28
CLK1P49759 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.33□□□□□ -0.28
CLK1P49759 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CLK1P49759 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 OR8S1-201ENST00000310194 1080 ntBASIC13.32□□□□□ -0.28
CLK1P49759 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.32□□□□□ -0.28
CLK1P49759 AC010141.1-201ENST00000411585 623 ntBASIC13.32□□□□□ -0.28
CLK1P49759 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.32□□□□□ -0.28
CLK1P49759 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.32□□□□□ -0.28
CLK1P49759 CSF2RBP1-201ENST00000447905 391 ntBASIC13.32□□□□□ -0.28
CLK1P49759 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 MYADML-201ENST00000474610 2147 ntBASIC13.32□□□□□ -0.28
CLK1P49759 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.32□□□□□ -0.28
CLK1P49759 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.32□□□□□ -0.28
CLK1P49759 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.32□□□□□ -0.28
CLK1P49759 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLK1P49759 COX11-210ENST00000639671 696 ntBASIC13.32□□□□□ -0.28
CLK1P49759 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 KHSRPP1-201ENST00000427983 1768 ntBASIC13.32□□□□□ -0.28
CLK1P49759 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 AL590440.2-201ENST00000641973 1595 ntBASIC13.32□□□□□ -0.28
CLK1P49759 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.32□□□□□ -0.28
CLK1P49759 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CLK1P49759 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLK1P49759 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 KRT8P4-201ENST00000509735 1454 ntBASIC13.31□□□□□ -0.28
CLK1P49759 NCLP1-201ENST00000445357 1963 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms