Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.96■□□□□ 0.3
RFX5P48382 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.96■□□□□ 0.3
RFX5P48382 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.3
RFX5P48382 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX5P48382 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFX5P48382 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX5P48382 DDC-212ENST00000615193 1674 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX5P48382 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX5P48382 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX5P48382 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RFX5P48382 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 KRT8P42-201ENST00000405771 1399 ntBASIC16.95■□□□□ 0.3
RFX5P48382 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX5P48382 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX5P48382 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX5P48382 AC097065.1-201ENST00000425737 517 ntBASIC16.95■□□□□ 0.3
RFX5P48382 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX5P48382 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX5P48382 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX5P48382 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX5P48382 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RFX5P48382 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX5P48382 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX5P48382 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX5P48382 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX5P48382 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX5P48382 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX5P48382 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX5P48382 GCSHP3-201ENST00000431120 391 ntBASIC16.94■□□□□ 0.3
RFX5P48382 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX5P48382 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 RN7SL818P-201ENST00000485099 259 ntBASIC16.94■□□□□ 0.3
RFX5P48382 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX5P48382 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX5P48382 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX5P48382 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 RN7SL725P-201ENST00000606439 259 ntBASIC16.94■□□□□ 0.3
RFX5P48382 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX5P48382 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX5P48382 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX5P48382 PCDHA3-202ENST00000532566 4594 ntBASIC16.94■□□□□ 0.3
RFX5P48382 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX5P48382 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX5P48382 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFX5P48382 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms