Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COL15A1P39059 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.44■□□□□ 0.38
COL15A1P39059 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
COL15A1P39059 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 PHBP10-201ENST00000416467 784 ntBASIC17.44■□□□□ 0.38
COL15A1P39059 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.44■□□□□ 0.38
COL15A1P39059 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.44■□□□□ 0.38
COL15A1P39059 AC004686.1-201ENST00000605113 538 ntBASIC17.44■□□□□ 0.38
COL15A1P39059 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.44■□□□□ 0.38
COL15A1P39059 MEP1AP1-201ENST00000636082 1097 ntBASIC17.44■□□□□ 0.38
COL15A1P39059 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.44■□□□□ 0.38
COL15A1P39059 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COL15A1P39059 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL15A1P39059 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
COL15A1P39059 OR7E155P-201ENST00000412208 1014 ntBASIC17.43■□□□□ 0.38
COL15A1P39059 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 AC004522.1-201ENST00000419978 654 ntBASIC17.43■□□□□ 0.38
COL15A1P39059 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.43■□□□□ 0.38
COL15A1P39059 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
COL15A1P39059 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.43■□□□□ 0.38
COL15A1P39059 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC17.43■□□□□ 0.38
COL15A1P39059 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 LILRP2-202ENST00000413572 1383 ntBASIC17.43■□□□□ 0.38
COL15A1P39059 WASH7P-201ENST00000488147 1351 ntBASIC17.43■□□□□ 0.38
COL15A1P39059 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL15A1P39059 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.43■□□□□ 0.38
COL15A1P39059 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL15A1P39059 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL15A1P39059 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
COL15A1P39059 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL15A1P39059 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms