Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.35□□□□□ -0.11
FDFT1P37268 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FDFT1P37268 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FDFT1P37268 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 MARK2P5-201ENST00000507649 634 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 AL583810.1-201ENST00000553344 1045 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 AC013355.1-201ENST00000562625 723 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.35□□□□□ -0.11
FDFT1P37268 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.35□□□□□ -0.11
FDFT1P37268 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.35□□□□□ -0.11
FDFT1P37268 AL022334.2-201ENST00000610000 484 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.35□□□□□ -0.11
FDFT1P37268 AL139424.3-202ENST00000641619 917 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FDFT1P37268 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 MSNP1-201ENST00000511640 1732 ntBASIC14.35□□□□□ -0.11
FDFT1P37268 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
FDFT1P37268 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
FDFT1P37268 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FDFT1P37268 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FDFT1P37268 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 AL445250.1-201ENST00000641671 2259 ntBASIC14.34□□□□□ -0.11
FDFT1P37268 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
FDFT1P37268 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.34□□□□□ -0.11
FDFT1P37268 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.34□□□□□ -0.11
FDFT1P37268 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.34□□□□□ -0.11
FDFT1P37268 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.34□□□□□ -0.11
FDFT1P37268 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 AC126915.1-201ENST00000522847 1038 ntBASIC14.34□□□□□ -0.11
FDFT1P37268 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.34□□□□□ -0.11
FDFT1P37268 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 TUBB1P2-201ENST00000422712 1306 ntBASIC14.34□□□□□ -0.11
FDFT1P37268 TUBB1P1-201ENST00000503144 1300 ntBASIC14.34□□□□□ -0.11
FDFT1P37268 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FDFT1P37268 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FDFT1P37268 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.34□□□□□ -0.11
FDFT1P37268 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.33□□□□□ -0.11
FDFT1P37268 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
FDFT1P37268 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FDFT1P37268 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FDFT1P37268 AC004623.1-201ENST00000624592 2127 ntBASIC14.33□□□□□ -0.11
FDFT1P37268 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.33□□□□□ -0.11
FDFT1P37268 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FDFT1P37268 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.33□□□□□ -0.11
FDFT1P37268 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
FDFT1P37268 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FDFT1P37268 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.33□□□□□ -0.11
FDFT1P37268 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FDFT1P37268 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms