Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.73■□□□□ 0.43
RXRBP28702 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RXRBP28702 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 AL031587.5-201ENST00000624344 1849 ntBASIC17.73■□□□□ 0.43
RXRBP28702 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RXRBP28702 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 RN7SKP255-201ENST00000363442 313 ntBASIC17.73■□□□□ 0.43
RXRBP28702 RN7SKP203-201ENST00000363618 332 ntBASIC17.73■□□□□ 0.43
RXRBP28702 RN7SKP71-201ENST00000364558 318 ntBASIC17.73■□□□□ 0.43
RXRBP28702 7SK.1-201ENST00000365328 331 ntBASIC17.73■□□□□ 0.43
RXRBP28702 ARF1P2-201ENST00000392493 538 ntBASIC17.73■□□□□ 0.43
RXRBP28702 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC17.73■□□□□ 0.43
RXRBP28702 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
RXRBP28702 AL353997.3-201ENST00000586597 589 ntBASIC17.73■□□□□ 0.43
RXRBP28702 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC17.73■□□□□ 0.43
RXRBP28702 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 AC138430.2-201ENST00000624068 504 ntBASIC17.73■□□□□ 0.43
RXRBP28702 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RXRBP28702 TUBAP-201ENST00000425085 1352 ntBASIC17.73■□□□□ 0.43
RXRBP28702 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RXRBP28702 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
RXRBP28702 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RXRBP28702 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RXRBP28702 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RXRBP28702 ZDHHC8P1-202ENST00000418264 1403 ntBASIC17.72■□□□□ 0.43
RXRBP28702 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RXRBP28702 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RXRBP28702 GGT8P-201ENST00000418938 532 ntBASIC17.72■□□□□ 0.43
RXRBP28702 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC17.72■□□□□ 0.43
RXRBP28702 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC17.72■□□□□ 0.43
RXRBP28702 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC17.72■□□□□ 0.43
RXRBP28702 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC17.72■□□□□ 0.43
RXRBP28702 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RXRBP28702 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.72■□□□□ 0.43
RXRBP28702 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 NLK-203ENST00000582037 1503 ntTSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.72■□□□□ 0.43
RXRBP28702 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RXRBP28702 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RXRBP28702 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RXRBP28702 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.71■□□□□ 0.43
RXRBP28702 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RXRBP28702 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RXRBP28702 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms