Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATF3P18847 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.82■□□□□ 0.6
ATF3P18847 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ATF3P18847 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 AC040160.2-201ENST00000623816 1675 ntBASIC18.82■□□□□ 0.6
ATF3P18847 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.82■□□□□ 0.6
ATF3P18847 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.82■□□□□ 0.6
ATF3P18847 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.81■□□□□ 0.6
ATF3P18847 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC18.81■□□□□ 0.6
ATF3P18847 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATF3P18847 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 CACYBPP3-201ENST00000406011 625 ntBASIC18.81■□□□□ 0.6
ATF3P18847 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 AC079325.1-201ENST00000430386 857 ntBASIC18.81■□□□□ 0.6
ATF3P18847 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF3P18847 AKR1C6P-201ENST00000432950 983 ntBASIC18.81■□□□□ 0.6
ATF3P18847 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF3P18847 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF3P18847 RPL35P1-201ENST00000450819 370 ntBASIC18.81■□□□□ 0.6
ATF3P18847 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC18.81■□□□□ 0.6
ATF3P18847 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF3P18847 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATF3P18847 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF3P18847 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF3P18847 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATF3P18847 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF3P18847 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.81■□□□□ 0.6
ATF3P18847 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.8■□□□□ 0.6
ATF3P18847 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATF3P18847 AC093462.1-201ENST00000621167 1683 ntBASIC18.8■□□□□ 0.6
ATF3P18847 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 RCC2P1-201ENST00000452257 1476 ntBASIC18.8■□□□□ 0.6
ATF3P18847 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATF3P18847 KLK8-203ENST00000347619 555 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 AL356653.1-201ENST00000402743 360 ntBASIC18.8■□□□□ 0.6
ATF3P18847 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC18.8■□□□□ 0.6
ATF3P18847 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 PTPA-219ENST00000435305 530 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 AC005077.3-201ENST00000449614 213 ntBASIC18.8■□□□□ 0.6
ATF3P18847 AC008021.1-201ENST00000474180 414 ntBASIC18.8■□□□□ 0.6
ATF3P18847 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 HNRNPA1P4-201ENST00000509706 756 ntBASIC18.8■□□□□ 0.6
ATF3P18847 HAX1-211ENST00000532105 771 ntTSL 3 BASIC18.8■□□□□ 0.6
ATF3P18847 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC18.8■□□□□ 0.6
ATF3P18847 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 DERL2-206ENST00000572834 589 ntTSL 3 BASIC18.8■□□□□ 0.6
ATF3P18847 MIR3940-201ENST00000579148 102 ntBASIC18.8■□□□□ 0.6
ATF3P18847 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC18.8■□□□□ 0.6
ATF3P18847 AL078624.1-201ENST00000604004 547 ntBASIC18.8■□□□□ 0.6
ATF3P18847 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 AC079331.1-201ENST00000623200 1200 ntBASIC18.8■□□□□ 0.6
ATF3P18847 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
ATF3P18847 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATF3P18847 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF3P18847 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATF3P18847 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATF3P18847 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF3P18847 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms