Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 MIR1908-201ENST00000410394 80 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 HMGA1P1-201ENST00000415560 1062 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
ACAA1P09110 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 VDAC1P1-201ENST00000439229 848 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 RNMTL1P1-201ENST00000454103 560 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ACAA1P09110 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.14□□□□□ -0.47
ACAA1P09110 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.14□□□□□ -0.47
ACAA1P09110 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.14□□□□□ -0.47
ACAA1P09110 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
ACAA1P09110 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.14□□□□□ -0.47
ACAA1P09110 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.14□□□□□ -0.47
ACAA1P09110 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 FAM90A7P-201ENST00000382628 1395 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 FAM90A23P-201ENST00000400136 1395 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 AL357140.3-201ENST00000639753 1983 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 RPL13AP3-202ENST00000494676 1473 ntBASIC12.14□□□□□ -0.47
ACAA1P09110 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.13□□□□□ -0.47
ACAA1P09110 AC244107.1-201ENST00000442033 332 ntBASIC12.13□□□□□ -0.47
ACAA1P09110 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.13□□□□□ -0.47
ACAA1P09110 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.13□□□□□ -0.47
ACAA1P09110 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.13□□□□□ -0.47
ACAA1P09110 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.13□□□□□ -0.47
ACAA1P09110 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.13□□□□□ -0.47
ACAA1P09110 AL136295.7-201ENST00000619226 1200 ntBASIC12.13□□□□□ -0.47
ACAA1P09110 AC022748.3-201ENST00000621828 275 ntBASIC12.13□□□□□ -0.47
ACAA1P09110 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.13□□□□□ -0.47
ACAA1P09110 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.13□□□□□ -0.47
ACAA1P09110 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ACAA1P09110 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ACAA1P09110 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms