Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.98□□□□□ -0.33
THBS1P07996 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.98□□□□□ -0.33
THBS1P07996 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 AC091804.1-201ENST00000486888 567 ntBASIC12.98□□□□□ -0.33
THBS1P07996 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 RCC2P8-201ENST00000502779 1035 ntBASIC12.98□□□□□ -0.33
THBS1P07996 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.98□□□□□ -0.33
THBS1P07996 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.98□□□□□ -0.33
THBS1P07996 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.98□□□□□ -0.33
THBS1P07996 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.98□□□□□ -0.33
THBS1P07996 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
THBS1P07996 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 CR383656.2-201ENST00000548656 2254 ntBASIC12.98□□□□□ -0.33
THBS1P07996 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 AC018735.1-201ENST00000437208 1502 ntBASIC12.98□□□□□ -0.33
THBS1P07996 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
THBS1P07996 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.98□□□□□ -0.33
THBS1P07996 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
THBS1P07996 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
THBS1P07996 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.97□□□□□ -0.33
THBS1P07996 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.97□□□□□ -0.33
THBS1P07996 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 MSNP1-201ENST00000511640 1732 ntBASIC12.97□□□□□ -0.33
THBS1P07996 AL365181.3-201ENST00000605886 3222 ntBASIC12.97□□□□□ -0.33
THBS1P07996 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
THBS1P07996 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.97□□□□□ -0.33
THBS1P07996 AC104306.2-201ENST00000451877 341 ntBASIC12.97□□□□□ -0.33
THBS1P07996 BX284668.4-201ENST00000453917 508 ntBASIC12.97□□□□□ -0.33
THBS1P07996 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.97□□□□□ -0.33
THBS1P07996 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.97□□□□□ -0.33
THBS1P07996 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
THBS1P07996 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.97□□□□□ -0.33
THBS1P07996 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC12.97□□□□□ -0.33
THBS1P07996 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 AC079791.1-201ENST00000605356 973 ntBASIC12.97□□□□□ -0.33
THBS1P07996 AC068587.10-201ENST00000641210 219 ntBASIC12.97□□□□□ -0.33
THBS1P07996 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
THBS1P07996 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
THBS1P07996 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
THBS1P07996 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms