Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 IRF3-215ENST00000596822 823 ntTSL 3 BASIC11.12□□□□□ -0.63
TRGV3P03979 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC11.12□□□□□ -0.63
TRGV3P03979 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 AC015909.3-201ENST00000572855 1794 ntBASIC11.12□□□□□ -0.63
TRGV3P03979 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
TRGV3P03979 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV3P03979 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV3P03979 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV3P03979 BRD7P5-201ENST00000299197 1822 ntBASIC11.12□□□□□ -0.63
TRGV3P03979 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TRGV3P03979 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TRGV3P03979 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 AC006335.1-201ENST00000445200 547 ntBASIC11.11□□□□□ -0.63
TRGV3P03979 AL596276.2-201ENST00000447525 331 ntBASIC11.11□□□□□ -0.63
TRGV3P03979 AL133466.1-201ENST00000447582 150 ntBASIC11.11□□□□□ -0.63
TRGV3P03979 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC11.11□□□□□ -0.63
TRGV3P03979 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC11.11□□□□□ -0.63
TRGV3P03979 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
TRGV3P03979 BAP1-211ENST00000615113 489 ntBASIC11.11□□□□□ -0.63
TRGV3P03979 MIR6769A-201ENST00000617340 73 ntBASIC11.11□□□□□ -0.63
TRGV3P03979 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV3P03979 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV3P03979 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
TRGV3P03979 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 LINC01815-202ENST00000641468 1409 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
TRGV3P03979 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
TRGV3P03979 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms