Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 AC073869.1-201ENST00000415574 2762 ntBASIC12.38□□□□□ -0.43
NPIPB4C9JG80 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPB4C9JG80 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 MIR769-201ENST00000390225 118 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 GGTLC4P-201ENST00000402176 664 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC092658.1-201ENST00000505836 891 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC145285.5-201ENST00000562217 361 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC126335.2-201ENST00000623362 4637 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC040160.2-201ENST00000623816 1675 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 AC026271.4-201ENST00000578214 1833 ntBASIC12.37□□□□□ -0.43
NPIPB4C9JG80 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB4C9JG80 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 DLX4-206ENST00000611342 1662 ntBASIC12.36□□□□□ -0.43
NPIPB4C9JG80 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB4C9JG80 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms