Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 BX537318.2-201ENST00000624893 4162 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AL589987.1-201ENST00000453380 819 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC009955.4-201ENST00000597192 544 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC004835.2-201ENST00000603762 682 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AL662799.1-202ENST00000614205 422 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AP001059.3-201ENST00000619053 235 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AC007431.3-201ENST00000623221 587 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AL391294.1-201ENST00000641352 4068 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 AL583810.2-201ENST00000556430 3254 ntBASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SMIM3Q9BZL3 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 SALL4P6-201ENST00000429385 1691 ntBASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
SMIM3Q9BZL3 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 MIR1224-201ENST00000408193 85 ntBASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 HLA-J-203ENST00000494367 1087 ntBASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMIM3Q9BZL3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms