Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 MTATP6P11-201ENST00000428071 670 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 AL157407.1-201ENST00000435784 904 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 Z97180.1-201ENST00000445173 988 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 MTCYBP11-201ENST00000447254 1109 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 VN1R48P-201ENST00000448149 1036 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC098826.2-201ENST00000452011 651 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 PGGT1BP1-201ENST00000455321 1023 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 RPL18P13-201ENST00000478088 569 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 HLA-J-204ENST00000495278 958 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC125604.1-201ENST00000496255 707 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 OR4A46P-201ENST00000527255 933 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 RBM8B-201ENST00000555532 525 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 SNORD3B-2-202ENST00000571722 791 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC013731.1-201ENST00000604340 883 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC106872.11-201ENST00000605838 421 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 Z93930.3-201ENST00000607919 749 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 FO681491.1-202ENST00000623392 737 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 OR6C71P-202ENST00000641886 1107 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 AC089987.1-201ENST00000551654 2209 ntBASIC12.86□□□□□ -0.35
USB1Q9BQ65 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.86□□□□□ -0.35
USB1Q9BQ65 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
USB1Q9BQ65 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 MTND3P20-201ENST00000407663 186 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AL133466.1-201ENST00000447582 150 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC005077.2-201ENST00000449786 690 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC068408.1-201ENST00000577406 1144 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC008805.1-201ENST00000590892 364 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC026740.1-201ENST00000607068 791 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC016542.1-201ENST00000608259 493 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC133540.1-201ENST00000620845 1019 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 AC138907.10-201ENST00000623708 983 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 AHCYP4-201ENST00000419201 1315 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 CCNT2P1-201ENST00000423082 1315 ntBASIC12.85□□□□□ -0.35
USB1Q9BQ65 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms