Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VGLL1Q99990 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC016694.1-201ENST00000434179 700 ntBASIC10.74□□□□□ -0.69
VGLL1Q99990 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC007389.4-201ENST00000454674 793 ntBASIC10.74□□□□□ -0.69
VGLL1Q99990 RN7SL752P-201ENST00000463779 287 ntBASIC10.74□□□□□ -0.69
VGLL1Q99990 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC10.74□□□□□ -0.69
VGLL1Q99990 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 ZACNP1-201ENST00000612259 710 ntBASIC10.74□□□□□ -0.69
VGLL1Q99990 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 CR392039.2-201ENST00000623182 509 ntBASIC10.74□□□□□ -0.69
VGLL1Q99990 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 E2F3P2-201ENST00000447755 1422 ntBASIC10.74□□□□□ -0.69
VGLL1Q99990 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC10.74□□□□□ -0.69
VGLL1Q99990 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC10.74□□□□□ -0.69
VGLL1Q99990 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC10.74□□□□□ -0.69
VGLL1Q99990 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VGLL1Q99990 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
VGLL1Q99990 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 ABCD1P2-201ENST00000429313 1601 ntBASIC10.73□□□□□ -0.69
VGLL1Q99990 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 NME1-209ENST00000511355 1645 ntTSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 CCT8L1P-201ENST00000465400 1674 ntBASIC10.73□□□□□ -0.69
VGLL1Q99990 AP002761.4-201ENST00000565433 3361 ntBASIC10.73□□□□□ -0.69
VGLL1Q99990 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.73□□□□□ -0.69
VGLL1Q99990 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
VGLL1Q99990 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VGLL1Q99990 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.73□□□□□ -0.69
VGLL1Q99990 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.73□□□□□ -0.69
VGLL1Q99990 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC10.73□□□□□ -0.69
VGLL1Q99990 PTPRVP-205ENST00000641549 5067 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms