Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 MIR2392-201ENST00000584881 84 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 AC007881.3-201ENST00000608897 607 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 AL445250.1-201ENST00000641671 2259 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 GUSBP10-201ENST00000417412 665 ntBASIC20.22■□□□□ 0.83
SIN3AQ96ST3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 AC132825.4-202ENST00000578792 434 ntBASIC20.22■□□□□ 0.83
SIN3AQ96ST3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SIN3AQ96ST3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 F2-205ENST00000530231 1849 ntTSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 RN7SL81P-201ENST00000493781 261 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 HERC2P11-201ENST00000562845 725 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AC100756.2-201ENST00000569537 736 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AL805961.1-201ENST00000642026 753 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AC040160.2-201ENST00000623816 1675 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AC245140.2-201ENST00000624054 1939 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 CICP17-201ENST00000418553 2377 ntBASIC20.21■□□□□ 0.83
SIN3AQ96ST3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIN3AQ96ST3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.83
SIN3AQ96ST3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SIN3AQ96ST3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SIN3AQ96ST3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIN3AQ96ST3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms