Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CRAMP1Q96RY5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 LINC02486-201ENST00000604157 3000 ntBASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 FDPSP7-201ENST00000429043 1054 ntBASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AK2P2-201ENST00000439142 405 ntBASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 MARK2P17-201ENST00000498560 841 ntBASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AP000920.1-201ENST00000531824 344 ntBASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 RN7SL162P-201ENST00000579233 292 ntBASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRAMP1Q96RY5 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 TCAM1P-207ENST00000485295 1537 ntBASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 U73169.1-201ENST00000395152 367 ntBASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 AC011431.1-201ENST00000512971 230 ntBASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CRAMP1Q96RY5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms