Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC006987.1-201ENST00000413610 527 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC010740.1-201ENST00000417035 684 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC073869.2-201ENST00000417338 1026 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL258P-201ENST00000478664 300 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 TMEM198B-204ENST00000484016 896 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 FGFR3P5-201ENST00000564496 886 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC060766.1-201ENST00000590824 627 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AL021707.6-201ENST00000609212 491 ntBASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD3Q7Z3D4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ARL4AP4-201ENST00000434170 518 ntBASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL455P-201ENST00000580629 282 ntBASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL190P-201ENST00000582519 257 ntBASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL121P-201ENST00000584223 273 ntBASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 AC012044.1-201ENST00000603431 297 ntBASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD3Q7Z3D4 KRT8P31-201ENST00000504812 1408 ntBASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD3Q7Z3D4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms