Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 COL6A4P2-202ENST00000504443 2753 ntBASIC14.78□□□□□ -0.04
IRX4P78413 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
IRX4P78413 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IRX4P78413 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
IRX4P78413 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IRX4P78413 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IRX4P78413 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
IRX4P78413 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
IRX4P78413 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
IRX4P78413 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
IRX4P78413 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.77□□□□□ -0.04
IRX4P78413 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
IRX4P78413 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.77□□□□□ -0.04
IRX4P78413 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
IRX4P78413 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 RN7SKP175-201ENST00000408472 289 ntBASIC14.77□□□□□ -0.05
IRX4P78413 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.77□□□□□ -0.05
IRX4P78413 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.77□□□□□ -0.05
IRX4P78413 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.77□□□□□ -0.05
IRX4P78413 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.77□□□□□ -0.05
IRX4P78413 AC103810.10-201ENST00000606504 343 ntBASIC14.77□□□□□ -0.05
IRX4P78413 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.77□□□□□ -0.05
IRX4P78413 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 DGCR9-201ENST00000609630 2415 ntBASIC14.77□□□□□ -0.05
IRX4P78413 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
IRX4P78413 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.77□□□□□ -0.05
IRX4P78413 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
IRX4P78413 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 KRT8P24-201ENST00000560290 1559 ntBASIC14.77□□□□□ -0.05
IRX4P78413 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IRX4P78413 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 AC020910.6-201ENST00000623084 1459 ntBASIC14.76□□□□□ -0.05
IRX4P78413 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
IRX4P78413 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.76□□□□□ -0.05
IRX4P78413 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 MYADML-201ENST00000474610 2147 ntBASIC14.76□□□□□ -0.05
IRX4P78413 HLA-J-204ENST00000495278 958 ntBASIC14.76□□□□□ -0.05
IRX4P78413 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.76□□□□□ -0.05
IRX4P78413 AC009779.1-201ENST00000551138 283 ntBASIC14.76□□□□□ -0.05
IRX4P78413 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.76□□□□□ -0.05
IRX4P78413 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
IRX4P78413 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 AP001065.2-201ENST00000617205 644 ntBASIC14.76□□□□□ -0.05
IRX4P78413 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.76□□□□□ -0.05
IRX4P78413 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 AC027612.1-201ENST00000445234 2395 ntBASIC14.76□□□□□ -0.05
IRX4P78413 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
IRX4P78413 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.76□□□□□ -0.05
IRX4P78413 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IRX4P78413 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
IRX4P78413 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
IRX4P78413 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.75□□□□□ -0.05
IRX4P78413 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
IRX4P78413 AC111170.3-201ENST00000624282 2464 ntBASIC14.75□□□□□ -0.05
IRX4P78413 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IRX4P78413 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IRX4P78413 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
IRX4P78413 PPT1-213ENST00000641319 2388 ntBASIC14.75□□□□□ -0.05
IRX4P78413 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IRX4P78413 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IRX4P78413 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms