Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MRPL22P1-201ENST00000505398 616 ntBASIC10.32□□□□□ -0.76
APOC4P55056 CD164-210ENST00000512821 964 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC10.32□□□□□ -0.76
APOC4P55056 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC10.32□□□□□ -0.76
APOC4P55056 AC140113.1-201ENST00000603467 169 ntBASIC10.32□□□□□ -0.76
APOC4P55056 AC087045.2-201ENST00000606279 1003 ntBASIC10.32□□□□□ -0.76
APOC4P55056 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 AC067931.2-201ENST00000623655 2003 ntBASIC10.31□□□□□ -0.76
APOC4P55056 BX640514.1-201ENST00000583223 1918 ntBASIC10.31□□□□□ -0.76
APOC4P55056 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.31□□□□□ -0.76
APOC4P55056 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 FTX-216ENST00000638985 1367 ntTSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 AC106881.1-201ENST00000605849 3329 ntBASIC10.31□□□□□ -0.76
APOC4P55056 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 HIST2H2BA-201ENST00000412169 381 ntBASIC10.31□□□□□ -0.76
APOC4P55056 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC10.31□□□□□ -0.76
APOC4P55056 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC10.31□□□□□ -0.76
APOC4P55056 AC018463.1-201ENST00000456674 917 ntBASIC10.31□□□□□ -0.76
APOC4P55056 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC10.31□□□□□ -0.76
APOC4P55056 RPL18AP3-201ENST00000462885 528 ntBASIC10.31□□□□□ -0.76
APOC4P55056 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC10.31□□□□□ -0.76
APOC4P55056 RNA5SP417-201ENST00000516459 108 ntBASIC10.31□□□□□ -0.76
APOC4P55056 NPM1P43-201ENST00000558669 786 ntBASIC10.31□□□□□ -0.76
APOC4P55056 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 MIR3180-2-201ENST00000581748 88 ntBASIC10.31□□□□□ -0.76
APOC4P55056 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.31□□□□□ -0.76
APOC4P55056 WDR7-208ENST00000589935 544 ntTSL 4 BASIC10.31□□□□□ -0.76
APOC4P55056 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC10.31□□□□□ -0.76
APOC4P55056 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 AC107464.3-201ENST00000609172 737 ntBASIC10.31□□□□□ -0.76
APOC4P55056 RN7SL736P-201ENST00000613111 269 ntBASIC10.31□□□□□ -0.76
APOC4P55056 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC10.31□□□□□ -0.76
APOC4P55056 AC009145.4-201ENST00000625119 1294 ntBASIC10.31□□□□□ -0.76
APOC4P55056 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
APOC4P55056 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
APOC4P55056 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOC4P55056 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms