Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 STK24P1-201ENST00000455035 1291 ntBASIC13.13□□□□□ -0.31
EFNA3P52797 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.13□□□□□ -0.31
EFNA3P52797 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.13□□□□□ -0.31
EFNA3P52797 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 MIR4265-201ENST00000582152 99 ntBASIC13.13□□□□□ -0.31
EFNA3P52797 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 MIR4649-201ENST00000582839 64 ntBASIC13.13□□□□□ -0.31
EFNA3P52797 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 AC087392.5-201ENST00000612517 489 ntBASIC13.13□□□□□ -0.31
EFNA3P52797 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 AL122018.1-201ENST00000446607 2310 ntBASIC13.13□□□□□ -0.31
EFNA3P52797 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.13□□□□□ -0.31
EFNA3P52797 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.13□□□□□ -0.31
EFNA3P52797 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.13□□□□□ -0.31
EFNA3P52797 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
EFNA3P52797 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 AC073869.1-201ENST00000415574 2762 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 Z69890.1-201ENST00000382990 339 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.12□□□□□ -0.31
EFNA3P52797 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.12□□□□□ -0.31
EFNA3P52797 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 RPL17P11-201ENST00000417593 544 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.12□□□□□ -0.31
EFNA3P52797 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.12□□□□□ -0.31
EFNA3P52797 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.12□□□□□ -0.31
EFNA3P52797 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.12□□□□□ -0.31
EFNA3P52797 KRT8P2-201ENST00000556193 944 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.12□□□□□ -0.31
EFNA3P52797 AC145285.5-201ENST00000562217 361 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.12□□□□□ -0.31
EFNA3P52797 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
EFNA3P52797 AL161773.1-201ENST00000624845 863 ntBASIC13.12□□□□□ -0.31
EFNA3P52797 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
EFNA3P52797 ODCP-201ENST00000459650 1639 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms