Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CLK1P49759 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.35□□□□□ -0.27
CLK1P49759 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 AOC4P-203ENST00000566825 2289 ntBASIC13.34□□□□□ -0.27
CLK1P49759 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.34□□□□□ -0.27
CLK1P49759 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 AC011481.3-201ENST00000623895 5594 ntBASIC13.34□□□□□ -0.27
CLK1P49759 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 CHMP1AP1-201ENST00000445563 662 ntBASIC13.34□□□□□ -0.27
CLK1P49759 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.34□□□□□ -0.27
CLK1P49759 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLK1P49759 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CLK1P49759 DUX4L45-201ENST00000566406 1057 ntBASIC13.34□□□□□ -0.27
CLK1P49759 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLK1P49759 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CLK1P49759 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.34□□□□□ -0.27
CLK1P49759 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 AC215219.1-201ENST00000400706 1817 ntBASIC13.34□□□□□ -0.27
CLK1P49759 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLK1P49759 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.34□□□□□ -0.27
CLK1P49759 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLK1P49759 AC139712.1-201ENST00000378256 1875 ntBASIC13.33□□□□□ -0.27
CLK1P49759 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.33□□□□□ -0.27
CLK1P49759 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLK1P49759 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.33□□□□□ -0.27
CLK1P49759 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLK1P49759 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLK1P49759 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
CLK1P49759 AL157996.1-201ENST00000624684 2299 ntBASIC13.33□□□□□ -0.28
CLK1P49759 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CLK1P49759 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CLK1P49759 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLK1P49759 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms