Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CHATP28329 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 E2F3P2-201ENST00000447755 1422 ntBASIC12.09□□□□□ -0.47
CHATP28329 CCT8L1P-201ENST00000465400 1674 ntBASIC12.09□□□□□ -0.47
CHATP28329 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CHATP28329 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.09□□□□□ -0.47
CHATP28329 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
CHATP28329 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CHATP28329 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.09□□□□□ -0.47
CHATP28329 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHATP28329 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CHATP28329 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
CHATP28329 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CHATP28329 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CHATP28329 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.08□□□□□ -0.48
CHATP28329 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.08□□□□□ -0.48
CHATP28329 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 HIST2H2BB-201ENST00000449108 381 ntBASIC12.08□□□□□ -0.48
CHATP28329 AC007551.1-201ENST00000457394 519 ntBASIC12.08□□□□□ -0.48
CHATP28329 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.08□□□□□ -0.48
CHATP28329 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 IGHV3-71-201ENST00000523324 359 ntBASIC12.08□□□□□ -0.48
CHATP28329 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.08□□□□□ -0.48
CHATP28329 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.08□□□□□ -0.48
CHATP28329 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 BTNL10-201ENST00000595971 695 ntBASIC12.08□□□□□ -0.48
CHATP28329 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.08□□□□□ -0.48
CHATP28329 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
CHATP28329 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.08□□□□□ -0.48
CHATP28329 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.08□□□□□ -0.48
CHATP28329 AC061965.1-201ENST00000560524 1465 ntBASIC12.08□□□□□ -0.48
CHATP28329 AC007952.5-201ENST00000572818 1486 ntBASIC12.08□□□□□ -0.48
CHATP28329 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHATP28329 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.07□□□□□ -0.48
CHATP28329 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CHATP28329 AL805961.2-201ENST00000642139 4817 ntBASIC12.07□□□□□ -0.48
CHATP28329 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.07□□□□□ -0.48
CHATP28329 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.07□□□□□ -0.48
CHATP28329 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CHATP28329 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHATP28329 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms