Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.51
COL8A2P25067 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
COL8A2P25067 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SHMT1P1-201ENST00000419974 1312 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 TUBB8P4-201ENST00000511806 1324 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 DGCR9-201ENST00000609630 2415 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 AL354861.1-201ENST00000445213 355 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC11.89□□□□□ -0.51
COL8A2P25067 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SLC25A15P3-201ENST00000505530 290 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC11.89□□□□□ -0.51
COL8A2P25067 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC11.89□□□□□ -0.51
COL8A2P25067 OR5BD1P-201ENST00000532527 817 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 AP000911.2-201ENST00000534330 502 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 NEU3-207ENST00000534628 746 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.89□□□□□ -0.51
COL8A2P25067 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 CR383656.3-201ENST00000551315 183 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 AC145285.5-201ENST00000562217 361 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 MIR2392-201ENST00000584881 84 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 AP000322.3-201ENST00000608665 388 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 AL137784.3-201ENST00000623858 2288 ntBASIC11.89□□□□□ -0.51
COL8A2P25067 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.89□□□□□ -0.51
COL8A2P25067 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
COL8A2P25067 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
COL8A2P25067 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
COL8A2P25067 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.88□□□□□ -0.51
COL8A2P25067 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
COL8A2P25067 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
COL8A2P25067 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms