Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB4AP20338 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB4AP20338 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB4AP20338 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
RAB4AP20338 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 FAAHP1-202ENST00000446499 1238 ntBASIC10.84□□□□□ -0.67
RAB4AP20338 RNA5SP416-201ENST00000516838 111 ntBASIC10.84□□□□□ -0.67
RAB4AP20338 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 AC026150.2-201ENST00000564693 1156 ntBASIC10.84□□□□□ -0.67
RAB4AP20338 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.84□□□□□ -0.67
RAB4AP20338 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 AL590440.2-201ENST00000641973 1595 ntBASIC10.84□□□□□ -0.67
RAB4AP20338 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
RAB4AP20338 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB4AP20338 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
RAB4AP20338 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 HSPA8P5-201ENST00000456928 2069 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
RAB4AP20338 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB4AP20338 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 AL355102.3-201ENST00000554299 1678 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 SLC7A3-202ENST00000374299 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB4AP20338 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 HLA-K-203ENST00000430151 1046 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB4AP20338 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB4AP20338 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB4AP20338 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB4AP20338 AL079307.3-201ENST00000556114 283 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB4AP20338 RN7SL510P-201ENST00000581311 263 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB4AP20338 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB4AP20338 LINC01115-203ENST00000606068 577 ntBASIC10.83□□□□□ -0.68
RAB4AP20338 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms