Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 AC010395.2-201ENST00000509899 904 ntBASIC8.34□□□□□ -1.07
APOBP04114 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 AC068134.4-201ENST00000613365 122 ntBASIC8.34□□□□□ -1.07
APOBP04114 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 AC091905.3-201ENST00000624959 234 ntBASIC8.34□□□□□ -1.07
APOBP04114 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
APOBP04114 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC8.34□□□□□ -1.07
APOBP04114 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC8.34□□□□□ -1.07
APOBP04114 CNN2P1-201ENST00000453616 918 ntBASIC8.34□□□□□ -1.07
APOBP04114 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 AC140479.7-201ENST00000636301 2332 ntBASIC8.34□□□□□ -1.07
APOBP04114 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
APOBP04114 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 AC023157.3-201ENST00000619086 2088 ntBASIC8.34□□□□□ -1.07
APOBP04114 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
APOBP04114 AL133517.1-201ENST00000413412 748 ntBASIC8.34□□□□□ -1.08
APOBP04114 DERL1-204ENST00000519018 575 ntTSL 4 BASIC8.34□□□□□ -1.08
APOBP04114 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
APOBP04114 RN7SL678P-201ENST00000579533 299 ntBASIC8.34□□□□□ -1.08
APOBP04114 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC8.34□□□□□ -1.08
APOBP04114 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC8.34□□□□□ -1.08
APOBP04114 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC8.34□□□□□ -1.08
APOBP04114 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
APOBP04114 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 IL6RP1-201ENST00000417848 1273 ntBASIC8.33□□□□□ -1.08
APOBP04114 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC8.33□□□□□ -1.08
APOBP04114 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 ZSCAN5DP-201ENST00000600684 1488 ntBASIC8.33□□□□□ -1.08
APOBP04114 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 SNORA50D-201ENST00000408059 134 ntBASIC8.33□□□□□ -1.08
APOBP04114 GAPDHP65-201ENST00000425487 1006 ntBASIC8.33□□□□□ -1.08
APOBP04114 MIR2277-201ENST00000515916 93 ntBASIC8.33□□□□□ -1.08
APOBP04114 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC8.33□□□□□ -1.08
APOBP04114 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC8.33□□□□□ -1.08
APOBP04114 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 MYB-201ENST00000316528 3571 ntTSL 5 BASIC8.33□□□□□ -1.08
APOBP04114 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
APOBP04114 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
APOBP04114 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms