Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
KRT6AP02538 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 FAM90A7P-201ENST00000382628 1395 ntBASIC13.71□□□□□ -0.22
KRT6AP02538 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 FAM90A23P-201ENST00000400136 1395 ntBASIC13.71□□□□□ -0.22
KRT6AP02538 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.71□□□□□ -0.22
KRT6AP02538 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
KRT6AP02538 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.7□□□□□ -0.22
KRT6AP02538 AC005034.1-201ENST00000426657 489 ntBASIC13.7□□□□□ -0.22
KRT6AP02538 VDAC1P1-201ENST00000439229 848 ntBASIC13.7□□□□□ -0.22
KRT6AP02538 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.7□□□□□ -0.22
KRT6AP02538 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.7□□□□□ -0.22
KRT6AP02538 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.7□□□□□ -0.22
KRT6AP02538 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.7□□□□□ -0.22
KRT6AP02538 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
KRT6AP02538 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.7□□□□□ -0.22
KRT6AP02538 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRT6AP02538 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
KRT6AP02538 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 AC068760.1-201ENST00000493579 1953 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 AL359845.1-201ENST00000458202 1648 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.69□□□□□ -0.22
KRT6AP02538 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 KRT223P-202ENST00000449164 1292 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 RNMTL1P1-201ENST00000454103 560 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.69□□□□□ -0.22
KRT6AP02538 RPSAP36-202ENST00000494591 1261 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 HLA-J-204ENST00000495278 958 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 AC005730.2-201ENST00000564549 1184 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.69□□□□□ -0.22
KRT6AP02538 COX11-210ENST00000639671 696 ntBASIC13.69□□□□□ -0.22
KRT6AP02538 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
KRT6AP02538 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRT6AP02538 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms