Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
IFNA1P01562 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 PUDPP3-201ENST00000445368 636 ntBASIC11.15□□□□□ -0.62
IFNA1P01562 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 MIR6080-201ENST00000617359 66 ntBASIC11.15□□□□□ -0.62
IFNA1P01562 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
IFNA1P01562 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.15□□□□□ -0.62
IFNA1P01562 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.15□□□□□ -0.63
IFNA1P01562 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
IFNA1P01562 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.15□□□□□ -0.63
IFNA1P01562 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
IFNA1P01562 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
IFNA1P01562 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.14□□□□□ -0.63
IFNA1P01562 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
IFNA1P01562 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.14□□□□□ -0.63
IFNA1P01562 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
IFNA1P01562 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.14□□□□□ -0.63
IFNA1P01562 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.14□□□□□ -0.63
IFNA1P01562 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 RBPMS2P1-201ENST00000437762 623 ntBASIC11.14□□□□□ -0.63
IFNA1P01562 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.14□□□□□ -0.63
IFNA1P01562 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.14□□□□□ -0.63
IFNA1P01562 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.14□□□□□ -0.63
IFNA1P01562 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.14□□□□□ -0.63
IFNA1P01562 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.14□□□□□ -0.63
IFNA1P01562 BX088702.1-201ENST00000610784 235 ntBASIC11.14□□□□□ -0.63
IFNA1P01562 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.14□□□□□ -0.63
IFNA1P01562 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
IFNA1P01562 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.14□□□□□ -0.63
IFNA1P01562 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC11.14□□□□□ -0.63
IFNA1P01562 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
IFNA1P01562 AC241952.1-201ENST00000612480 6897 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 RCC2P1-201ENST00000452257 1476 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.13□□□□□ -0.63
IFNA1P01562 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
IFNA1P01562 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 AL590824.1-201ENST00000403828 1349 ntBASIC11.13□□□□□ -0.63
IFNA1P01562 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
IFNA1P01562 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.13□□□□□ -0.63
IFNA1P01562 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
IFNA1P01562 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
IFNA1P01562 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms