Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 TUBB8P4-201ENST00000511806 1324 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 DUTP3-201ENST00000450025 415 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 RTN3P1-201ENST00000536295 711 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.6□□□□□ -0.39
CNOT4O95628 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
CNOT4O95628 MEG3_2.1-201ENST00000611456 105 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 COX6A1P2-201ENST00000620597 330 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 AC097359.2-201ENST00000604992 2389 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 AC015909.3-201ENST00000572855 1794 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 LINC01815-202ENST00000641468 1409 ntBASIC12.6□□□□□ -0.39
CNOT4O95628 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.6□□□□□ -0.39
CNOT4O95628 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNOT4O95628 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.6□□□□□ -0.39
CNOT4O95628 AC020910.6-201ENST00000623084 1459 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNOT4O95628 TCAM1P-207ENST00000485295 1537 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 HSPA7-201ENST00000445535 1927 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 AC027601.5-201ENST00000624065 2482 ntBASIC12.59□□□□□ -0.39
CNOT4O95628 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNOT4O95628 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.59□□□□□ -0.39
CNOT4O95628 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms