Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 MTHFR-210ENST00000641407 2387 ntBASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 AC022080.1-201ENST00000366255 781 ntBASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 AL080243.1-201ENST00000423293 1060 ntBASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 MME-218ENST00000625667 363 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCDC187A0A096LP49 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms