Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PCDHA6-201ENST00000378126 3267 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
KRTAP4-3Q9BYR4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
KRTAP4-3Q9BYR4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC019109.1-201ENST00000401725 1874 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL445209.1-201ENST00000607269 3491 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC007952.5-201ENST00000572818 1486 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 RN7SL788P-201ENST00000460504 316 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC093801.2-201ENST00000503966 1050 ntBASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP4-3Q9BYR4 AC091917.2-201ENST00000505002 744 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms