Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AC004554.1-201ENST00000422830 1468 ntBASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 MIR1301-201ENST00000408518 82 ntBASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 RPL3P2-204ENST00000413027 1203 ntBASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 BRI3P1-201ENST00000440440 378 ntBASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 EEF1GP8-201ENST00000506566 1154 ntBASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 GOLGA2P7-209ENST00000560408 745 ntBASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SYNGAP1Q96PV0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 BEND3P1-201ENST00000421591 1944 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 OR2W2P-201ENST00000406313 909 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AC073210.1-201ENST00000414799 232 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 BPIFB5P-201ENST00000457066 1099 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AC093300.1-201ENST00000510368 1201 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 TREHP1-201ENST00000531328 465 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 AP005212.2-201ENST00000584979 510 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 CYP4F36P-201ENST00000589193 186 ntBASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNGAP1Q96PV0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNGAP1Q96PV0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms