Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 RNA5SP288-201ENST00000516075 93 ntBASIC16.67■□□□□ 0.26
SNED1Q8TER0 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 ABCC6P1-203ENST00000565566 1170 ntBASIC16.67■□□□□ 0.26
SNED1Q8TER0 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 RCC2P5-201ENST00000492126 1487 ntBASIC16.67■□□□□ 0.26
SNED1Q8TER0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 FAM45BP-202ENST00000592932 1624 ntBASIC16.67■□□□□ 0.26
SNED1Q8TER0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
SNED1Q8TER0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNED1Q8TER0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 AL356000.1-201ENST00000441073 1238 ntBASIC16.66■□□□□ 0.26
SNED1Q8TER0 AC026412.1-206ENST00000502273 206 ntBASIC16.66■□□□□ 0.26
SNED1Q8TER0 AC022447.5-201ENST00000504817 392 ntBASIC16.66■□□□□ 0.26
SNED1Q8TER0 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 IGHVII-74-1-201ENST00000517572 241 ntBASIC16.66■□□□□ 0.26
SNED1Q8TER0 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.66■□□□□ 0.26
SNED1Q8TER0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNED1Q8TER0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 SNORA47-201ENST00000458862 138 ntBASIC16.65■□□□□ 0.26
SNED1Q8TER0 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 NAA38-204ENST00000575208 529 ntTSL 3 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 RN7SL478P-201ENST00000584358 298 ntBASIC16.65■□□□□ 0.26
SNED1Q8TER0 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 AL353622.2-201ENST00000605846 425 ntBASIC16.65■□□□□ 0.26
SNED1Q8TER0 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 AC008622.3-201ENST00000621170 600 ntBASIC16.65■□□□□ 0.26
SNED1Q8TER0 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.65■□□□□ 0.26
SNED1Q8TER0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNED1Q8TER0 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.65■□□□□ 0.26
SNED1Q8TER0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SNED1Q8TER0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SNED1Q8TER0 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SNED1Q8TER0 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNED1Q8TER0 AC034205.3-201ENST00000603595 1376 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms