Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 AC134698.3-201ENST00000523880 214 ntBASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 AC242376.1-201ENST00000559033 726 ntBASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 MIR4754-201ENST00000582477 89 ntBASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 LINC01783-202ENST00000614408 828 ntBASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 BX284668.2-205ENST00000619677 828 ntBASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 AC079336.7-201ENST00000623428 1078 ntBASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.46■□□□□ 0.23
SMARCC2Q8TAQ2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMARCC2Q8TAQ2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SMARCC2Q8TAQ2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SMARCC2Q8TAQ2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SMARCC2Q8TAQ2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.46■□□□□ 0.22
SMARCC2Q8TAQ2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SMARCC2Q8TAQ2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 RPS9P1-201ENST00000419943 583 ntBASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 RN7SL258P-201ENST00000478664 300 ntBASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 RN7SL455P-201ENST00000580629 282 ntBASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 AC004623.1-201ENST00000624592 2127 ntBASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMARCC2Q8TAQ2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SMARCC2Q8TAQ2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms