Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AL645937.6-201ENST00000641122 3727 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AL031719.1-201ENST00000623365 2587 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AC024075.2-201ENST00000598112 1473 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AL391647.1-201ENST00000395664 511 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 FAM197Y7-201ENST00000432892 766 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BCRP2-202ENST00000447763 634 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 CICP12-201ENST00000455801 843 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 COX5BP1-201ENST00000507622 393 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BCRP6-201ENST00000510112 632 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BCRP7-201ENST00000511549 544 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 MIR4683-201ENST00000579659 81 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BTNL10-201ENST00000595971 695 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 AL358472.5-202ENST00000641448 1267 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 AL354989.2-201ENST00000435838 1540 ntBASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DNAAF1Q8NEP3 AC010141.1-201ENST00000411585 623 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms