Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AL805961.2-201ENST00000642139 4817 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC026954.1-201ENST00000429771 1293 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC234783.1-201ENST00000441761 496 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 KLF2P4-201ENST00000451959 1225 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CTBP2P5-201ENST00000454986 1264 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC079316.1-201ENST00000548397 411 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC100827.2-201ENST00000563214 1194 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC124068.2-201ENST00000569473 1109 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 MIR3197-201ENST00000582241 73 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC009955.4-201ENST00000597192 544 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AC073957.3-201ENST00000609998 6758 ntBASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC50Q8IVM0 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 PCDHB18P-202ENST00000526308 3197 ntBASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 AK2P2-201ENST00000439142 405 ntBASIC14.96□□□□□ -0.01
CCDC50Q8IVM0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms