Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC25Q86WR0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC25Q86WR0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC25Q86WR0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC25Q86WR0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 AC073413.1-201ENST00000603927 732 ntBASIC14.61□□□□□ -0.07
CCDC25Q86WR0 AL136301.1-201ENST00000615830 422 ntBASIC14.61□□□□□ -0.07
CCDC25Q86WR0 RPSAP52-203ENST00000622976 1023 ntBASIC14.61□□□□□ -0.07
CCDC25Q86WR0 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 KRT8P4-201ENST00000509735 1454 ntBASIC14.61□□□□□ -0.07
CCDC25Q86WR0 LINC00638-201ENST00000555578 2518 ntBASIC14.61□□□□□ -0.07
CCDC25Q86WR0 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC25Q86WR0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 POM121L14P-201ENST00000406100 1558 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 C2orf27AP3-201ENST00000434123 579 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 COX5BP1-201ENST00000507622 393 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 AC008825.2-201ENST00000603374 718 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 AL354718.3-201ENST00000616414 581 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 CR382287.1-201ENST00000623954 586 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms