Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 PDIA3P1-201ENST00000471856 1510 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC112492.5-201ENST00000421897 457 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CROCCP4-201ENST00000457096 498 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC078819.1-201ENST00000547454 765 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC012085.1-201ENST00000548270 765 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 OR10B1P-201ENST00000601666 907 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AL512343.1-201ENST00000605837 169 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC138696.2-201ENST00000607376 223 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AHCYP2-201ENST00000430630 1300 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 DLX4-206ENST00000611342 1662 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AL136172.1-201ENST00000598590 1394 ntBASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM53Q6P2H8 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 KHSRPP1-201ENST00000427983 1768 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AC006001.1-201ENST00000325130 474 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CTBP2P5-201ENST00000454986 1264 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AC104989.1-201ENST00000519711 778 ntBASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.04□□□□□ -0.32
TMEM53Q6P2H8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms