Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 PRMT1P1-201ENST00000604252 1009 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 KF455155.1-201ENST00000604493 303 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 INTS4P1-203ENST00000641008 3683 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 Z98885.3-201ENST00000624882 1757 ntBASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 RN7SL602P-201ENST00000578326 324 ntBASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 RN7SL718P-201ENST00000581254 303 ntBASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 FTLP5-201ENST00000586853 534 ntBASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 HSPA8P5-201ENST00000456928 2069 ntBASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD4Q5XG99 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 AL513477.1-201ENST00000602865 2407 ntBASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 OR7E155P-201ENST00000412208 1014 ntBASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 RPL18AP16-201ENST00000424057 531 ntBASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.62□□□□□ -0.23
LYSMD4Q5XG99 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms