Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC008894.3-201ENST00000624324 3103 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AP005117.1-202ENST00000581724 1908 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CACYBPP3-201ENST00000406011 625 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 RN7SL148P-201ENST00000467120 279 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AP003170.2-201ENST00000544730 786 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 MIR4326-201ENST00000582203 59 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TCAF2P1-201ENST00000291129 2421 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AL139424.2-202ENST00000641335 1369 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 AL031673.1-201ENST00000611460 466 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 MIR8071-1-201ENST00000616769 65 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 MIR8071-2-201ENST00000616772 65 ntBASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RIF1Q5UIP0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 HNRNPA1P68-201ENST00000425806 979 ntBASIC13.36□□□□□ -0.27
RIF1Q5UIP0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 TPI1P3-201ENST00000335020 740 ntBASIC13.36□□□□□ -0.27
RIF1Q5UIP0 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 AC012100.1-201ENST00000470304 282 ntBASIC13.36□□□□□ -0.27
RIF1Q5UIP0 HNRNPA1P69-201ENST00000552536 933 ntBASIC13.36□□□□□ -0.27
RIF1Q5UIP0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RIF1Q5UIP0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms