Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 AC007292.2-201ENST00000593524 1812 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 CFL1P6-201ENST00000400899 494 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 KRT18P46-201ENST00000435568 1279 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 PEBP1P3-201ENST00000455475 548 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 BPIFB5P-201ENST00000457066 1099 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 AC008825.2-201ENST00000603374 718 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 NEK4P3-201ENST00000604859 544 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 AC080013.5-201ENST00000607044 679 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 BX640514.1-201ENST00000583223 1918 ntBASIC12.54□□□□□ -0.4
CACNA1DQ01668 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.54□□□□□ -0.4
CACNA1DQ01668 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CACNA1DQ01668 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 ACTG1P19-201ENST00000418987 1116 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 EEF1DP5-201ENST00000431410 772 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 AL590440.2-201ENST00000641973 1595 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC098657.1-201ENST00000416270 1135 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 OR51A9P-201ENST00000422578 911 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC131206.1-201ENST00000538078 1211 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC004466.2-201ENST00000614749 516 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 AC015912.3-201ENST00000619432 348 ntBASIC12.53□□□□□ -0.4
CACNA1DQ01668 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms