Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.54□□□□□ -0.4
EFNB1P98172 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.54□□□□□ -0.4
EFNB1P98172 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 AC027796.2-201ENST00000575326 344 ntBASIC12.54□□□□□ -0.4
EFNB1P98172 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 AC020763.3-201ENST00000625095 2904 ntBASIC12.54□□□□□ -0.4
EFNB1P98172 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 BRD7P5-201ENST00000299197 1822 ntBASIC12.53□□□□□ -0.4
EFNB1P98172 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
EFNB1P98172 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB1P98172 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 RPL7P3-201ENST00000441388 714 ntBASIC12.53□□□□□ -0.4
EFNB1P98172 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB1P98172 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB1P98172 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.53□□□□□ -0.4
EFNB1P98172 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB1P98172 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB1P98172 AC132938.2-201ENST00000579188 680 ntBASIC12.53□□□□□ -0.4
EFNB1P98172 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 AC008687.7-202ENST00000637404 953 ntBASIC12.53□□□□□ -0.4
EFNB1P98172 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 AC110048.1-201ENST00000604293 2157 ntBASIC12.53□□□□□ -0.4
EFNB1P98172 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 AOC4P-203ENST00000566825 2289 ntBASIC12.53□□□□□ -0.4
EFNB1P98172 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB1P98172 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
EFNB1P98172 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
EFNB1P98172 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms