Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 AL513477.1-201ENST00000602865 2407 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 AC097474.1-201ENST00000506481 1371 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 NRADDP-202ENST00000641269 1585 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AC079325.1-201ENST00000430386 857 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 CA5BP1-205ENST00000435806 1064 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 AC023051.2-201ENST00000541141 460 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 PPY-202ENST00000587006 431 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 COG6-212ENST00000630730 186 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AL139424.3-202ENST00000641619 917 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AL390755.1-201ENST00000623716 2027 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 AC093462.1-201ENST00000621167 1683 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AC089987.1-201ENST00000551654 2209 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 RNA5SP491-201ENST00000362936 118 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 SNORD88B-201ENST00000408454 91 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 DNM1P46-202ENST00000415963 882 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AF186996.6-201ENST00000485294 149 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 AL450346.2-201ENST00000495602 1024 ntBASIC16.38■□□□□ 0.21
CNTNAP1P78357 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTNAP1P78357 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTNAP1P78357 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CNTNAP1P78357 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTNAP1P78357 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms