Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.33□□□□□ -0.43
DEFA3P59666 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
DEFA3P59666 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 CICP2-201ENST00000420675 2328 ntBASIC12.33□□□□□ -0.44
DEFA3P59666 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA3P59666 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 AC074386.1-202ENST00000463561 864 ntBASIC12.33□□□□□ -0.44
DEFA3P59666 GAPDHP40-201ENST00000505218 1006 ntBASIC12.33□□□□□ -0.44
DEFA3P59666 AC026434.2-201ENST00000506094 1078 ntBASIC12.33□□□□□ -0.44
DEFA3P59666 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.33□□□□□ -0.44
DEFA3P59666 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA3P59666 BANF1P1-201ENST00000553684 263 ntBASIC12.33□□□□□ -0.44
DEFA3P59666 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.33□□□□□ -0.44
DEFA3P59666 AL603764.1-201ENST00000636452 321 ntBASIC12.33□□□□□ -0.44
DEFA3P59666 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
DEFA3P59666 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
DEFA3P59666 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA3P59666 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA3P59666 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 AL590440.2-201ENST00000641973 1595 ntBASIC12.32□□□□□ -0.44
DEFA3P59666 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 AL355306.1-201ENST00000415580 579 ntBASIC12.32□□□□□ -0.44
DEFA3P59666 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.32□□□□□ -0.44
DEFA3P59666 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 SERBP1P3-201ENST00000459980 809 ntBASIC12.32□□□□□ -0.44
DEFA3P59666 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.32□□□□□ -0.44
DEFA3P59666 AC092910.1-201ENST00000482027 1129 ntBASIC12.32□□□□□ -0.44
DEFA3P59666 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 AC022616.1-201ENST00000518688 554 ntBASIC12.32□□□□□ -0.44
DEFA3P59666 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 AC091304.2-201ENST00000564639 760 ntBASIC12.32□□□□□ -0.44
DEFA3P59666 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.32□□□□□ -0.44
DEFA3P59666 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA3P59666 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA3P59666 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA3P59666 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms